PipelineCommands – bbmri
Below is the current GoNL pipeline commands along with rough execution times when available on the cluster as of January 25th 2011: This analysis pipeline consists of two parts. The first one is based on lane analysis. Afterwards lanes are merged and analysis per lane is conducted. Lane analysis L1. Fastq to check read quality /tools/FastQC/fastqc /data/filename_1.fq.gz \ -Dfastqc.output_dir=/outp
BBMRI/GvNL 'bionformatics for biobanking' wiki
BBMRI-NL Rainbow projects: RP2 - Dynamic bioinformatics infrastructures for biobank enrichment The BIOS Consortium (Biobank-based Integrative Omics Studies) To gain access to restricted areas (RP3) please fill in a code of conduct (please contact Bas Heijmans for this CoC, b.t.heijmans AT lumc.nl) Send after approval an email to the GCC helpdesk to get an account (helpdesk.gcc.groningen AT gmail.c
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