3D Slicer image computing platform
3D Slicer is a free, open source software for visualization, processing, segmentation, registration, and analysis of medical, biomedical, and other 3D images and meshes; and planning and navigating image-guided procedures. Desktop software to solve advanced image computing challenges with a focus on clinical and biomedical applications. Development platform to quickly build and deploy custom solut
while my_mcmc: gently(samples) - Animating MCMC with PyMC and Matplotlib
Here’s the deal: I used PyMC, matplotlib, and Jake Vanderplas’ JSAnimation to create javascript animations of three MCMC sampling algorithms – Metropolis-Hastings, slice sampling and NUTS. I like visualizations because they provide a good intuition for how the samplers work and what problems they can run into. You can download the full notebook here or view it in your browser. Note that for this p
Matplotlib Animation Tutorial | Pythonic Perambulations
Matplotlib version 1.1 added some tools for creating animations which are really slick. You can find some good example animations on the matplotlib examples page. I thought I'd share here some of the things I've learned when playing around with these tools. Basic Animation The animation tools center around the matplotlib.animation.Animation base class, which provides a framework around which the a
Gephi, オープンソースのグラフ可視化・操作ソフトウェア
Gephi が再び Google Summer of Code (GSoC 2011) に認定されました！ Google Summer of Code は、世界各地の学生がオープンソースプロジェクトに貢献することができるたいへん優れたプログラムです。詳細はこちら » 応用例 探索的データ解析: リアルタイムでのネットワーク操作による直感的分析。 リンク解析: 特にスケールフリーネットワークにおけるオブジェクト間関係の根本構造の明確化。 ソーシャルネットワーク分析: さまざまなコミュニティ組織やスモールワールドネットワークをマップ化できるソーシャルデータコネクタを簡単に作成可能。 生物学的ネットワーク解析: 生物学的データのパターンを表現。 ポスター制作: 高解像度の印刷可能グラフで学術研究成果をプロモート。 詳細はこちら » 各種のメトリクスを用意 中心性 (Centrality): 社会
Matplotlib: Python plotting — Matplotlib 2.0.0 documentation
Matplotlib: Visualization with Python Matplotlib is a comprehensive library for creating static, animated, and interactive visualizations in Python. Matplotlib makes easy things easy and hard things possible. Create publication quality plots. Make interactive figures that can zoom, pan, update. Customize visual style and layout. Export to many file formats. Embed in JupyterLab and Graphical User I
ggplot2
ggplot2 is a plotting system for R, based on the grammar of graphics, which tries to take the good parts of base and lattice graphics and none of the bad parts. It takes care of many of the fiddly details that make plotting a hassle (like drawing legends) as well as providing a powerful model of graphics that makes it easy to produce complex multi-layered graphics. Documentation ggplot2 documentat
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https://tips.hecomi.com/entry/20101209/1291888423
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