Shell Scripts Matter
Thibaut Rousseau Posted on Mar 12, 2017 • Updated on Dec 7, 2018 • Originally published at blog.thibaut-rousseau.com The shell is an odd beast. Although it goes against every current trend in software engineering (strong typing, compile checks over runtime checks, ...), shell scripts are here to stay, and still constitute an important part of every developer's life. The weird thing about shell scr
Using Names Pipes and Process Substitution in Bioinformatics | vince buffalo
It’s hard not to fall in love with Unix as a bioinformatician. In a past post I mentioned how Unix pipes are an extremely elegant way to interface bioinformatics programs (and do inter-process communication in general). In exploring other ways of interfacing programs in Unix, I’ve discovered two great but overlooked ways of interfacing programs: the named pipe and process substitution. Why We Love
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