Reverse Complement
Reverse Complement converts a DNA sequence into its reverse, complement, or reverse-complement counterpart. You may want to work with the reverse-complement of a sequence if it contains an ORF on the reverse strand. Paste the raw or FASTA sequence into the text area below. >Sample sequence GGGGaaaaaaaatttatatat Convert the DNA sequence into its counterpart.
NCBI eUtilsで何ができるのか
いきなりeUtilsでウェブサービス、とか早まった気がしたので、 まずeUtilsでどのようなツールがあり、何ができるのかを調べてみました。 まあぶっちゃけ英語が読める人は本家サイトを読んだ方が早いと思いますが自分用のメモということで。 EInfo Provides field index term counts, last update, and available links for each database. eUtilsで使用できる各データベースのフィールドやデータ数、 最新更新日などを知ることができる。 ESearch Searches and retrieves primary IDs (for use in EFetch, ELink, and ESummary) and term translations and optionally retains results fo
Genomearchitect.GitHub.io
First instantaneous, collaborative genomic annotation editor available on the Web.Apollo is designed to support geographically dispersed researchers, and the work of a distributed community is coordinated through automatic synchronization: all edits in one client are instantly pushed to all other clients, allowing users to see annotation updates from collaborators in real-time during the editing p
BioMoby – A world of data at your fingertips
Now available! Click-through to the full blog post for a link! Andreas Groscurth at the Max Planck Institute, Cologne, has made the Moby Dashboard available as a Java WebStart app! Well done Andreas! Dashboard is the most powerful and comprehensive “view” of the BioMoby project, allowing you to browse the registry and ontologies, add new nodes into the ontology, delete un-used nodes, and register/
Tools for Multiple Alignments
Search for sequence similarities in databases WU-BLAST at ISREC (Lausanne, Switzerland) BLAST2 Search at EMBL (Heidelberg, Germany) Performs multiple alignment on homologous sequences detected by BLAST. FASTA at EBI (Hinxton, UK) Smith-Waterman search at EBI (Hinxton, UK) BCM search launcher (Houston, USA) GeneStream at CRBM (Montpellier, France) BLAST search at PBIL (Lyon, France) Possibility to
TreeView X
Note that the code for TreeView X is now available from Google Code. TreeView X is an open source program to display phylogenetic trees on Linux, Unix, Mac OS X, and Windows platforms. It can read and display NEXUS and Newick format tree files (such as those output by PAUP*, ClustalX, TREE-PUZZLE, and other programs). It has a subset of the functionality of the version of TreeView available for th
TreeView
Tree drawing software for Apple Macintosh and Windows (and now Linux and Unix) TreeView is a simple program for displaying phylogenies on Apple Macintosh and Windows PCs. It has the following features: runs on both the Apple Macintosh and Windows Pcs, using almost identical interfaces reads many different tree file formats (including NEXUS, PHYLIP, Hennig86, NONA, MEGA, and ClustalW/X) supports st
Felsenstein/Kuhner lab
These web pages have moved, as of 31 August 2023. If you want to find: The PHYLIP web pages, go here: https://phylipweb.github.io/phylip/ The LAMARC web pages, go here: https://lamarcweb.github.io/lamarcweb/ Joe Felsenstein's web pages, go here: https://felsenst.github.io/ Keep these addresses in mind, in case you need to go back to them. It will take search engines such as Google a while to reali
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Molecular Evolution, Phylogenetics and Epidemiology
Google Directory - Science > Chemistry > Software > Structural > Visualization
http://www.bioinf.manchester.ac.uk/ctree/
Taxonomy Retrieval System V2.08
Home Page | Molecular Biology Toolkit (MBT)
Yufeng Wu | Yufeng Wu's Homepage
GuruGuruBioMap
http://www.biojs.org/biomap/BIOMAP.html?maptype=METABOLIC_MAP
http://www.ch.embnet.org/software/BOX_form.html
http://bioweb.pasteur.fr/cgi-bin/seqanal/review-edital.pl
IMEG Lab - Software
msa.sbc.su.se