Whole genome alignment howto - genomewiki
2018 UPDATE NOTE This page is an interesting historical discussion and well worth the read. HOWEVER, please note, the UCSC tool chain command: DoBlastzChainNet.pl can now perform this entire sequence of events in your environment with your selected genome sequences. doBlastzChainNet.pl The procedure described here is for a lift over construction between two different species genomes. There is a di
Maq, BWA, and Bowtie Compared | MassGenomics
Notice: Function add_theme_support( 'html5' ) was called incorrectly. You need to pass an array of types. Please see Debugging in WordPress for more information. (This message was added in version 3.6.1.) in /home/dkoboldt/public_html/massgenomics/wp-includes/functions.php on line 6031 Until recently, Maq has provided the central alignment/assembly/variant-detection functionality for our Illumina
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