Empirical Bayes Inference of Pairwise FST and Its Distribution in the Genome
INFERRING genetic population structure has been a major theme in population biology, ecology, and human genetics. The fixation index FST, introduced by Wright (1951), is a key parameter for such studies and is most commonly used to measure genetic divergence among subpopulations (Palsbøll et al. 2007). It is defined as the correlation between random gametes drawn from the same subpopulation relati
BEAST Software - Bayesian Evolutionary Analysis Sampling Trees | BEAST Documentation
What is BEAST? BEAST is a cross-platform program for Bayesian analysis of molecular sequences using MCMC. It is entirely orientated towards rooted, time-measured phylogenies inferred using strict or relaxed molecular clock models. It can be used as a method of reconstructing phylogenies but is also a framework for testing evolutionary hypotheses without conditioning on a single tree topology. BEAS
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msBayes: Pipeline for testing comparative phylogeographic histories using hierarchical approximate Bayesian computation
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