Molecular dynamics - Wikipedia
Example of a molecular dynamics simulation in a simple system: deposition of one copper (Cu) atom on a cold crystal of copper (Miller index (001) surface). Each circle represents the position of one atom. The kinetic energy of the atom approaching from the top is redistributed among the other atoms, so instead of bouncing off it remains attached due to attractive forces between the atoms. Molecula
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iGEM 2006 - The International Genetically Engineered Machine Competition
http://parts.mit.edu/r/parts/igem/index.cgi
Sirius visualization software - Wikipedia
