WebGBrowse
WebGBrowse - A Web Server for GBrowse The Generic Genome Browser (GBrowse) is one of the most widely used visualization tool for displaying genomic features along a reference sequence. However, the installation and configuration of GBrowse can be tedious for many biologists who are not computer savvy or lack adequate computational resources. WebGBrowse allows users to upload their genomic data and
Genedata Expressionist
Home Products & Services Biopharma Platform Digitalizing R&D Services Biopharma R&D Services BIOLOGICS Biotherapeutics Discovery Overview Applications Our Applications Bispecifics CARs/TCRs AAVs ADCs Vaccines RNA Therapeutics B-Cells Developability Software Our Software Screening Engineering Production Request Services Our Services Customer Stories Our Customers Customer Talks BIOPROCESS Bioproces
Hive Plots - Linear Layout for Network Visualization - Visually Interpreting Network Structure and Content Made Possible
Rational Network Visualization — Farewell to hairballs Martin Krzywinski, Canada's Michael Smith Genome Sciences Center, Vancouver, BC the hive plot is a perceptually uniform and scalable linear layout visualization for network visual analytics UNDERSTANDING NETWORK STRUCTURE WITH HIVE PLOTS. (A) Normalized (top) and absolute (bottom) connectivity of E. coli gene regulatory network and Linux funct
Genome Savant
next generation, now Savant is a next-generation genome browser designed for the latest generation of genome data Next-Generation Built with the latest generation of sequencing data in mind. Use Savant to do next-gen analysis, today. Visual Analytics See your data at all scales, from genome-wide trends to nucleotide anomalies, Savant converts data and information, all visually. User Friendly Desig
Cytoscape retreat 2010 一日目(自分以外) - kozo2のはてなダイアリー
ミシガン大学で行われているCytoscapeの会議Cytoscape retreat 2010に来ています。 その模様をまとめます。 1日目はプラグインのデモが主でした。私も発表させて頂いたのですがまずは私以外の方の発表についてまとめます。 Analyzing biological networks with CentiScaPe 中心性解析をやってくれるプラグインです。このネットワークのトポロジーと生物学的な情報との関連を見出そうとすることはかなりベタによくやられることでそのトポロジー指標となる様々なCentralityを計算、プロットまでやってくれるプラグインです。 Web service client and server for phosphositeplus database Cell signaling technologyという会社が運営しているphosphositeplus
CytoscapeAndR - Cytoscape Wiki
Control Cytoscape from R Console Introduction CytoscapeRPC is a plugin for Cytoscape to use Cytoscape as a RPC server. You can call Cytoscape functions from variety of languages including Perl, Python, Ruby, and R. In this tutorial, you learn how to use Cytoscape from R console. Setup You need to install the following plugins/packages. Cytoscape Plugin Just copy the following jar files to Cytosc
MIRA
MIRA 4 - Whole Genome Shotgun and EST Sequence Assembler for Sanger, 454 and Solexa / Illumina MIRA is the swiss army knife of sequence assembly that I've used and developed during the past 16 years to get assembly jobs I work on done efficiently - and especially accurately. That is, without me actually putting too much manual work into it. Over time, other labs and sequencing providers have found
Tablet : Information & Computational Sciences
Tablet Tablet is a lightweight, high-performance graphical viewer for next generation sequence assemblies and alignments. Visit the download page to get the latest version of Tablet (1.21.02.08; 8th February 2021). Please cite: Milne I, Stephen G, Bayer M, Cock PJA, Pritchard L, Cardle L, Shaw PD and Marshall D. 2013. Using Tablet for visual exploration of second-generation sequencing data. Briefi
リリース、障害情報などのサービスのお知らせ
最新の人気エントリーの配信
j次のブックマーク
k前のブックマーク
lあとで読む
eコメント一覧を開く
oページを開く
http://www.eaglegenomics.com/wp-content/uploads/Periodic%20jpeg.jpg
CHROMATRA: a Galaxy tool for visualizing genome-wide chromatin signatures
genoPlotR: comparative gene and genome visualization in R
GenomeView: a next-generation genome browser
Tools
BamView: visualizing and interpretation of next-generation sequencing read alignments
GenomeView
Next-generation genomics: an integrative approach - Nature Reviews Genetics
Mauve
Wellesley College HCI Lab
Import Table to Genome Graphs
GenoViz
