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Software Open access Published: 29 November 2017 ImageJ2: ImageJ for the next generation of scientific image data Curtis T. Rueden1, Johannes Schindelin1,2, Mark C. Hiner1, Barry E. DeZonia1, Alison E. Walter1,2, Ellen T. Arena1,2 & …Kevin W. Eliceiri ORCID: orcid.org/0000-0001-8678-670X1,2 Show authors BMC Bioinformatics volume 18, Article number: 529 (2017) Cite this article BackgroundImageJ is
Software Open access Published: 15 February 2015 MeSH ORA framework: R/Bioconductor packages to support MeSH over-representation analysis Koki Tsuyuzaki1,5, Gota Morota2,3, Manabu Ishii5, Takeru Nakazato4, Satoru Miyazaki1 & …Itoshi Nikaido5 Show authors BMC Bioinformatics volume 16, Article number: 45 (2015) Cite this article BackgroundIn genome-wide studies, over-representation analysis (ORA) ag
Software Open access Published: 26 January 2011 VennDiagram: a package for the generation of highly-customizable Venn and Euler diagrams in R Hanbo Chen1 & Paul C Boutros1 BMC Bioinformatics volume 12, Article number: 35 (2011) Cite this article BackgroundVisualization of orthogonal (disjoint) or overlapping datasets is a common task in bioinformatics. Few tools exist to automate the generation of
Mistaken Identifiers: Gene name errors can be introduced inadvertently when using Excel in bioinformatics Correspondence Open access Published: 23 June 2004 Mistaken Identifiers: Gene name errors can be introduced inadvertently when using Excel in bioinformatics Barry R Zeeberg1, Joseph Riss2, David W Kane3, Kimberly J Bussey1, Edward Uchio4, W Marston Linehan4, J Carl Barrett2 & …John N Weinstein
Software Open access Published: 21 December 2007 Userscripts for the Life Sciences Egon L Willighagen1, Noel M O'Boyle2, Harini Gopalakrishnan3, Dazhi Jiao3, Rajarshi Guha3, Christoph Steinbeck4 & …David J Wild3 Show authors BMC Bioinformatics volume 8, Article number: 487 (2007) Cite this article BackgroundThe web has seen an explosion of chemistry and biology related resources in the last 15 yea
Proceedings Open access Published: 18 December 2006 An evaluation of human protein-protein interaction data in the public domain Suresh Mathivanan1,2,3, Balamurugan Periaswamy1,2,3, TKB Gandhi1,2, Kumaran Kandasamy1,3, Shubha Suresh1,2, Riaz Mohmood3, YL Ramachandra3 & …Akhilesh Pandey2 Show authors BMC Bioinformatics volume 7, Article number: S19 (2006) Cite this article BackgroundProtein-protein
Software Open access Published: 30 November 2006 BioMoby extensions to the Taverna workflow management and enactment software Edward Kawas1, Martin Senger2 & Mark D Wilkinson1 BMC Bioinformatics volume 7, Article number: 523 (2006) Cite this article BackgroundAs biology becomes an increasingly computational science, it is critical that we develop software tools that support not only bioinformatici
Research article Open access Published: 12 June 2006 ROKU: a novel method for identification of tissue-specific genes Koji Kadota1, Jiazhen Ye1, Yuji Nakai1, Tohru Terada1 & …Kentaro Shimizu1 Show authors BMC Bioinformatics volume 7, Article number: 294 (2006) Cite this article BackgroundOne of the important goals of microarray research is the identification of genes whose expression is considerab
Software Open access Published: 06 June 2006 Gene Designer: a synthetic biology tool for constructing artificial DNA segments Alan Villalobos1, Jon E Ness1, Claes Gustafsson1, Jeremy Minshull1 & …Sridhar Govindarajan1 Show authors BMC Bioinformatics volume 7, Article number: 285 (2006) Cite this article BackgroundDirect synthesis of genes is rapidly becoming the most efficient way to make function
Artificial intelligence for drug designGuest edited by Xing Chen and Yifeng Li Big data management in biological domainsGuest edited by Anna Bernasconi, Umberto Ferraro Petrillo and Simona E. Rombo
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