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Broad Institute of MIT and Harvard and Google Genomics are exploring the need for computing infrastructure to store and process enormous datasets, and tools to analyze such data and unravel long-standing mysteries about human health. Learn more about how the Broad Institute and Google are working together to make it easier for researchers to ask big questions and find answers amid complexity by re
The presentations below were filmed during the March 2015 GATK Workshop, part of the BroadE Workshop series. At the time of this workshop, the current version of Broad’s Genome Analysis Toolkit (GATK) was version 3.3. This workshop focused on the core steps involved in calling variants with Broad's Genome Analysis Toolkit, using the "Best Practices" developed by the GATK team. View the workshop ma
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NEWS: Check out our new catalog of single-cell single-molecule RNA-FISH images of 34 lncRNAs now available! Please select “lincRNA-FISH catalog” from the menu on the left. Large intergenic non-coding RNAs (lincRNAs) are emerging as key regulators of diverse cellular processes. Determining the function of individual lincRNAs remains a challenge. Recent advances in RNA sequencing (RNA-Seq) and compu
Genome Analysis Toolkit Variant Discovery in High-Throughput Sequencing Data Need Help? Search our documentation Community Forum Hi, How can we help? Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capabl
What's New April 15, 2010. The IGV team requests your support. Click here for details. February 5, 2010. IGV version 1.4.2 has been released. See the release notes for details. More... Subscribe Overview The Integrative Genomics Viewer (IGV) is a high-performance visualization tool for interactive exploration of large, integrated datasets. It supports a wide variety of data types including seque
What's New 10/15/2009: Two GenePattern video tutorials are now available. 9/18/2009: Cancer Outlier Profile Analysis (COPA) is now available on the GenePattern public server. An adaptation of the Bioconductor package (copa) by MacDonald (2006), the analysis can be used to identify recurrent chromosomal translocations in microarray data. 6/22/2009: GenePattern 3.2 is now available. New features inc
Broad Institute is a multidisciplinary community of researchers on a mission to improve human health.
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