Home Maq User's Manual Maq User's Manual Maq ManPage Maq Reference Manual Maq Aln Format Maq's .map format Maqview BWA glfProgs FAQ FASTQ Format FASTQ Format Specification Base & Mapping Qualities Understanding Qualities Color Alignment & SNPs Processing SOLiD Data Pooled SNP Calling SNPs from Pooled Samples Maq Mailing List Introduction Maq stands for Mapping and Assembly with Quality It builds a